We will identify relevant peaks
Usage
estimate_label_no_cap_rate_all_pks(r_by_t, in_r_by_c, pks_sel, alpha = 1)
Arguments
- r_by_t
Region-by cell type matrix generated from a annotated dataset
- in_r_by_c
Input (unannotated) region by cell matrix
- pks_sel
selected peaks as informative for cell type label prediction
- alpha
Weight for negative peaks, default = 1
Value
A matrix of cell types by cell matrix, with elements representing
probability of being in that cell type