Function for loading fragment files and filter by cell barcodes
Usage
load_fragments(fragment_tsv_gz_file_location, cells, verbose = TRUE)
Arguments
- fragment_tsv_gz_file_location
The 10X Cell Ranger output
fragment.tsv.gz file location. This can usually be found at the /out
directory from Cell Ranger output
- cells
The cell barcode lables as a Character vector
- verbose
Whether to output progress message. Default TRUE
Value
data.frame containing fragments that are filtered by cell barcodes